Best Accounting Software for Small Businesses in 2025

Managing finances is one of the most critical yet challenging tasks for small business owners. Keeping track of income, expenses, invoices, and tax obligations can quickly become overwhelming, especially as a business grows. That’s where accounting software for small businesses comes in—helping entrepreneurs streamline their financial processes, automate tasks, and gain valuable insights into their business performance.

With many options available, choosing the right accounting tool can make a significant difference. This guide highlights the best accounting software for small businesses in 2025, comparing features, pricing, and benefits to help you find the perfect fit.

QuickBooks

Key Features:

  • Comprehensive Financial Tracking: Manages income, expenses, and invoicing.
  • Customizable Reports: Offers detailed financial insights.
  • Payroll Integration: Easily handles employee payments (additional fee).
  • Inventory Management: Real-time tracking and reorder notifications.
  • Third-Party App Integration: Supports over 300 apps for added functionality.

QuickBooks remains one of the most popular small business accounting software solutions due to its comprehensive financial management capabilities. From invoicing and expense tracking to tax preparation and payroll, QuickBooks covers all essential business needs.

It also integrates with various business tools, allowing seamless financial management. The inventory tracking feature is particularly useful for businesses managing stock, providing real-time insights and reorder alerts.

Pricing:

  • Simple Start: $35/month
  • Essentials: $65/month
  • Plus: $99/month
  • Advanced: $235/month

Pros:
✓ Extensive financial reporting capabilities
✓ Robust inventory management
✓ High-level security and data encryption

Cons:
✗ Steep learning curve for beginners
✗ Occasional bank syncing issues

Xero

Xero

Key Features:

  • Bank Reconciliation: AI-powered suggestions for faster bookkeeping.
  • Multi-Currency Support: Ideal for businesses with international clients.
  • Real-Time Cash Flow Updates: Provides instant insights into financial health.
  • Project Tracking & Time Billing: Helps businesses monitor profitability.
  • Unlimited Users: Supports multiple users on all plans.

Xero is known for its user-friendly interface and strong collaboration features. It’s an excellent choice for small businesses that need multi-user access, as it allows unlimited users on all pricing tiers.

One of Xero’s standout features is its automated bank reconciliation, which uses machine learning to suggest matches for transactions, making bookkeeping faster and easier. Additionally, it offers built-in expense claims and project tracking for businesses looking to manage costs more efficiently.

Pricing:

  • Early Plan: $15/month (20 invoices & 5 bill entries)
  • Growing Plan: $47/month
  • Established Plan: $80/month (includes multi-currency and project tracking)

Pros:
✓ User-friendly and intuitive interface
✓ Strong integration marketplace
✓ Mobile app with real-time financial tracking

Cons:
✗ Payroll only available in select countries
✗ No phone support on some plans

FreshBooks

Key Features:

  • Time Tracking Integration: Logs hours and syncs with invoices.
  • Professional Invoicing: Customizable templates and recurring billing.
  • Expense Tracking: Automatic bank and credit card transaction imports.
  • Project Management Tools: Enables team collaboration and budget tracking.
  • Mobile App: Allows users to manage finances on the go.

FreshBooks is an excellent accounting software for small businesses, particularly for freelancers and service-based businesses that bill clients based on time. It offers a seamless invoicing system with customizable templates, automated reminders, and multi-currency support.

Another standout feature is its comprehensive project management tools, allowing teams to collaborate, share files, and track budgets efficiently. The software integrates with popular business tools like PayPal, Stripe, and G Suite for added convenience.

Pricing:

  • Lite: $19/month (up to 5 clients)
  • Plus: $33/month (up to 50 clients)
  • Premium: $60/month (unlimited clients)
  • Select: Custom pricing

Pros:
✓ Excellent customer support
✓ Seamless invoicing and time tracking
✓ Strong mobile app functionality

Cons:
✗ Limited inventory tracking
✗ Basic reporting features

Sage

Sage

Key Features:

  • Advanced Reporting: Real-time financial insights with customizable dashboards.
  • Multi-Currency and Multi-Company Support: Suitable for businesses with international operations.
  • Industry-Specific Modules: Tailored solutions for construction, manufacturing, and professional services.
  • Cloud-Based Access: Enables remote collaboration.
  • Automated Compliance Tools: Ensures tax and regulatory compliance.

Sage is a highly scalable accounting software that provides advanced financial management tools for growing businesses. It is especially beneficial for companies in specialized industries like construction, manufacturing, and retail, thanks to its tailored financial modules.

Sage also supports multi-entity accounting, making it ideal for businesses that operate across multiple locations. Additionally, its cloud-based platform allows seamless collaboration between team members and accountants.

Pricing:

  • Sage 50 Pro: $60/month
  • Sage 50 Premium: $104/month (up to 5 users)
  • Sage 50 Quantum: $177/month (up to 40 users)

Pros:
✓ Strong industry-specific features
✓ Robust security and compliance tools
✓ Advanced reporting and inventory management

Cons:
✗ Higher cost compared to competitors
✗ Fewer third-party integrations

Zoho Books

Key Features:

  • Automated Expense Tracking: Recurring expense management for subscriptions and bills.
  • Vendor Credit Management: Simplifies supplier refunds and adjustments.
  • Detailed Project Budgeting: Monitors expenses at a granular level.
  • Retainer Management: Prepaid invoicing for service-based businesses.
  • Electronic Signatures: Built-in for faster approvals.

Zoho Books is a cost-effective accounting software that offers powerful automation tools for small businesses. The free plan makes it an attractive choice for startups and entrepreneurs with annual revenue under $50,000.

One of Zoho Books’ strongest features is project financial integration, allowing users to track expenses, log billable hours, and invoice clients seamlessly. Its retainer management system is also useful for businesses that operate on prepaid services.

Pricing:

  • Free Plan: For businesses earning under $50,000/year
  • Standard: $15/month
  • Premium: $60/month

Pros:
✓ Strong automation features
✓ Affordable pricing
✓ Built-in project and retainer management

Cons:
✗ Limited inventory tracking
✗ No fixed asset management in lower-tier plans